Skip to content

Installation

neuroflow is a plugin for Claude Code, and only for Claude Code. Its commands, skills, agents and its optional mod layer all run inside Claude Code.


From the marketplace

In Claude Code v2.1.275 or later, one command adds the marketplace and installs the plugin:

/plugin install neuroflow --marketplace stanislavjiricek/neuroflow

Or in two steps, from a terminal:

claude plugin marketplace add stanislavjiricek/neuroflow
claude plugin install neuroflow@neuroflow

or inside Claude Code:

/plugin marketplace add stanislavjiricek/neuroflow
/plugin install neuroflow@neuroflow

After a new version arrives, run /neuroflow:migrate once in each project — see Upgrading.


Local development

Clone the repo and point Claude Code at it:

git clone https://github.com/stanislavjiricek/neuroflow
claude --plugin-dir ./neuroflow

This is the recommended way to contribute or test changes before they are released. The repo's CLAUDE.md describes its structure and conventions.


Verify installation

Open any project folder in Claude Code and run:

/neuroflow:neuroflow

You should see neuroflow scan your project and offer to set up .neuroflow/ project memory.


MCP server requirements

neuroflow uses three MCP (Model Context Protocol) servers that are launched automatically via npx. No manual installation is needed — they are pulled from npm on first use.

Server npm package Purpose
PubMed / bioRxiv paper-search-mcp-nodejs Literature and preprint search
Context7 @upstash/context7-mcp Library documentation lookup
Sequential thinking @modelcontextprotocol/server-sequential-thinking Structured multi-step reasoning

None needs credentials. Miro and Zotero are optional servers you add yourself — see Integrations.


System requirements

Requirement Notes
Claude Code v2.1.271 or later — older versions cannot load the plugin, because its settings offer fixed choices (userConfig options). The one-step /plugin install … --marketplace needs v2.1.275 or later. The optional mod is tested from v2.1.292; /neuroflow:doctor warns on older versions
Node.js Required for the MCP servers via npx
Python 3.10+ Recommended. /neuroflow and /migrate run small standard-library scripts; without Python, Claude does the same steps by hand. Also needed for analysis scripts you run

Uninstall

claude plugin uninstall neuroflow

Upgrading from an older version

Older neuroflow versions also wrote a neuroflow block into ~/.claude/CLAUDE.md, .github/copilot-instructions.md and AGENTS.md. Current versions keep a single static block in each project's .claude/CLAUDE.md. Run /neuroflow:migrate in a project to bring its memory up to the current format; it also points out the old blocks and offers to remove them.